Provides code, pretrained weights, and tooling for protein language models and structure prediction — including ESMC, ESMFold2, sparse autoencoders (SAEs), and the ESM Atlas. Includes model checkpoints, tutorials, Hugging Face & Biohub integration, and an MIT license.
High-accuracy biomolecular structure prediction suite: open-source models (protenix-v2/v1), a benchmark/evaluation toolkit, and a web server for inference. Targets protein/antibody–antigen and ligand-aware predictions with inference-time sampling and constraint support.
Autonomously executes diverse biomedical research tasks by combining LLM reasoning, retrieval-augmented planning, and code-based execution. Includes a web UI and Gradio demo, a curated Know‑How library, MCP integration, and a biology-tailored reasoning model (Biomni‑R0).
Provides 134 ready-to-use Agent Skills that let AI agents execute multi-step scientific workflows (bioinformatics, cheminformatics, imaging, clinical research). Each skill includes curated docs and examples plus unified access to 100+ scientific databases and common Python packages — for agents that support the Agent Skills standard.
A library of ~140 ready-to-use Agent Skills that turn a coding agent (Claude Code, Cursor, Codex) into a science assistant across biology, chemistry, medicine, and drug discovery, with connectors to 100+ scientific databases and Python analysis tools.
Benchmarks LLM and VLM capabilities for toxicity-aware molecular editing using toxicity‑cliff molecule pairs. It provides QA-formatted tasks and CSV splits for fragment identification, non-toxic fragment generation, and detoxified molecule generation—useful for safety evaluation and drug-discovery research.
Provides per-cell transcriptomes and five-day drug-sensitivity readouts for 1.83M single cells across 52 cancer cell lines and 91 drug conditions, with raw counts plus gene, cell-line, drug, and summary metadata for modeling drug response and context-dependent gene function.
A 9B reasoning LLM fine-tuned from Qwen3.5 that ships with a 1,048,576-token context, native function-calling and tool-use, and notable benchmark gains (+34 MMLU, +30 gsm8k-strict).
Performs native structural reasoning for proteins, small molecules and inorganic crystals by tokenizing coordinates, topologies and periodic connectivities into a unified structure-aware vocabulary. Treats structural tokens as addressable evidence to produce interpretable prediction traces and improves accuracy across biology, chemistry and materials benchmarks.